Date of Award

Summer 8-23-2025

Document Type

Dissertation

Degree Name

Ph.D. in Biological Sciences

Organizational Unit

College of Natural Science and Mathematics, Biological Sciences

First Advisor

James Todd Blankenship

Second Advisor

Dinah Loerke

Third Advisor

Schuyler van Engelenburg

Fourth Advisor

Mira Pronobis

Copyright Statement / License for Reuse

All Rights Reserved
All Rights Reserved.

Keywords

Centrosomal, Non-centrosoman, Nuclear dynamics, Epithelium, Drosophila embryos

Abstract

The morphogenesis of developing tissues relies on extensive cellular rearrangements in shape, position, and identity. A key process in reshaping tissues is cell intercalation-driven elongation, where epithelial cells align and intercalate along a common axis. Typically, analyses focus on how peripheral cortical forces influence cell shape changes. Less attention is given to how inhomogeneities in internal structures, particularly the nucleus, impact cell shaping. Here, we examine how pulsed contractile and extension dynamics interact with the nucleus in elongating Drosophila embryos. Our data show that tightly packed nuclei in apical layers hinder tissue remodeling/oscillatory behaviors. We identify two mechanisms for resolving internuclear tensions: nuclear deformation and dispersion. Embryos with non-deformable nuclei use nuclear dispersion to maintain near-normal extensile rates, while those with non-dispersible nuclei due to microtubule inhibition exhibit disruptions in contractile behaviors. Disrupting both mechanisms leads to severe tissue extension defects and cell extrusion. These findings highlight the critical role of nuclear shape and positioning in the topological remodeling of epithelia.

To further understand how nuclear dispersion along the apical-basal axis is regulated during the germband extension (GBE), we examined the structural reorganization of microtubule (MT) arrays over time. We find that the initial centrosome-derived MT network, which forms an inverted basket-like structure surrounding the nucleus, transitions into non-centrosomal MT (ncMT) arrays enriched at the apical cortex as GBE progresses. Disruption of Patronin, a minus-end tracking proteins (-TIP), impaired both perinuclear and apical MT pools, while inducing ectopic MT accumulation at centrosomes. This led to a failure in nuclear dispersion, with nuclei remaining densely packed in the apical domain. Patronin inhibition also reduced the proportion of nuclei undergoing active displacement and significantly slowed nuclear migration. Inhibiting CLASP, a plus-end tracking protein (+TIP), produced a similar disruption in MT organization, with even greater centrosomal enrichment. CLASP loss resulted in a striking reduction in the number of actively dispersing nuclei, disrupted apical-basal nuclear orientation and impaired nuclear anchoring to the apical cortex. Detailed examination of centrosomal MT enrichment in CLASP- and Patronin-depleted embryos revealed a competitive relationship between centrosomal and non-centrosomal MT populations, suggesting an antagonistic regulatory mechanism. We also observed compensatory interactions between γ-tubulin and patronin at centrosomes: γ-tubulin inhibition led to increased Patronin levels and enhanced total MT abundance, with only mild effects on nuclear dispersion. Finally, perturbation of EB1 disrupted the apical shift of the MT basket and impaired nuclear anchoring to the cortex, although apical-basal nuclear orientation was largely preserved. Together, these findings highlight the importance of properly organized and dynamically remodeled MT networks – particularly the transition from centrosomal to non-centrosomal arrays – for accurate nuclear positioning, orientation, and dispersion during epithelial tissue remodeling.

Copyright Date

8-2025

Publication Statement

Copyright is held by the author. User is responsible for all copyright compliance.

Rights Holder

Rashmi Budhathoki

Provenance

Received from ProQuest

File Format

application/pdf

Language

English (eng)

Extent

138 pgs

File Size

15 MB

Available for download on Friday, September 18, 2026



Share

COinS